利用反义RNA技术分析春化相关基因VER17在冬小麦花发育过程中的功能

为了研究小麦春化相关基因VER17的功能,应用反义RNA技术,将VER17基因的反义片段构建到载体pBI121上,通过花粉管通道法获取转基因小麦.对T0代转基因植株GUS染色以及PCR等分子鉴定,得到14株含反义VERJ7基因片段的阳性转基因植株.对T0代和T1代的表型观察结果显示,VER17反义转基因植株开花时间延迟,并且穗的顶部和基部小花出现明显的退化.表明春化相关基因VER17在小麦发育过程中可能起到促进植物开花以及穗顶端和基部花发育的作用,减少小花退化,同时对雄蕊的发育也有影响.     

耐低温酵母Curvibasidium rogersii菌株在松萝样品中的首次分离鉴定及基于基因组分析的生物特性探究

【目的】对西藏松萝地衣来源的两株非常规酵母进行分离鉴定,并通过基因组序列分析探究其生物学特性和应用潜力。【方法】从西藏来源的松萝地衣样品内部分离得到2株耐低温酵母菌株,通过26S D1/D2和ITS序列比对分析以及生理生化实验进行菌种鉴定;通过全基因组序列分析和验证探究菌株的生物特性。【结果】两株酵母菌株经鉴定均为Curvibasidium rogersii,可以在10℃低温良好生长,在20℃生长最佳,25℃及以上温度生长缓慢或不生长。对其进行基因组测序和基因组挖掘,测序结果发现,其基因组注释出功能的部分与产油脂的低温酵母白冬孢酵母Leucosporidium creatinivorum具有最高相似性,尼罗红染色发现两株酵母都能够生产油脂,另外在基因组序列中还发现了可能参与木糖代谢的相关蛋白编码基因,实验证明两个酵母菌株可以利用木糖生长。【结论】首次分离鉴定了来自西藏松萝的酵母C. rogersii,为充分开发利用松萝和其他地衣来源微生物,以及利用可代谢木糖的新资源酵母生产微生物油脂提供了基础。     

Understanding the Linkage between Elevation and the Activated-Sludge Bacterial Community along a 3,600-Meter Elevation Gradient in China

To understand the relationship between elevation and bacterial communities in wastewater treatment plants (WWTPs), bacterial communities in 21 municipal WWTPs across China, located 9 to 3,660 m above sea level (masl), were investigated by 454 pyrosequencing. A threshold for the association of elevation with bacterial community richness and evenness was observed at approximately 1,200 masl. At lower elevations, both richness and evenness were not significantly associated with elevation. At higher elevations, significant declines with increased elevations were observed for community richness and evenness. The declining evenness trend at the phylum level was reflected by distinct trends in relative abundance for individual bacterial phyla. Betaproteobacteria, Bacteroidetes, and Firmicutes displayed significant increases, while most other phyla showed declines. Spearman correlation analysis indicated that the community richness and evenness at high elevations were more correlated with elevation than with any other single environmental variable. Redundancy analysis indicated that the contribution of elevation to community composition variances increased from 3% at lower elevations to 11% at higher elevations whereas the community composition variance at higher elevations remained much more explained by operational variables (39.2%) than by elevation. The influent total phosphorus concentration, food/microorganism ratio, and treatment process were the three shared dominant contributors to the community composition variance across the whole elevation gradient, followed by effluent ammonia nitrogen and temperature at higher elevations.     

生物信息学软件研究的可视化分析

以Web of Science数据库为数据来源,利用Cite Space和UCINET软件对发表在Nucleic Acids Research期刊上有关生物信息学软件研究的文献做了可视化分析,揭示了该领域的研究力量、作者团队与高被引作者、知识基础、期刊分布、研究热点与前沿,为生物信息学软件的研究和发展提供必要的参考依据。     

Seasonal prevalence of mosquitoes collected from light traps in the Republic of Korea, 2006

Adult mosquito surveillance was conducted during 2006 at 22 US Army and Air Force installations and two training sites located in six provinces in the Republic of Korea. Adult mosquitoes were collected in New Jersey light traps from 1 May through 15 October 2006 to determine threshold levels to initiate pesticide applications based on trap indices. In total 16 217 adult mosquitoes [13 612 (83.9%) females and 2605 (16.1%) males] comprising 16 species (including five members of the Anopheles sinensis Group) belonging to eight genera were collected. Females of the most commonly collected species were members of the Anopheles sinensis Wiedemann Group (58.9%), followed by Aedes vexans nipponii (Theobald) (21.3%), Culex tritaeniorhynchus Giles (11.8%) and Culex pipiens Coquillett (5.2%). Trap indices varied widely for species over their range, due in part, to their geographical distribution and degree of association with urban or rural communities.     

HIV-1膜抗原部分位点的改造对假病毒形成及感染能力的影响

研究HIV-1膜抗原部分位点的改造对假病毒形成及病毒感染能力的影响。本实验采用环形诱变和DpnΙ筛选的方法对env进行定点突变。用获得的克隆和骨架质粒pSG3△env共转染293FT细胞,收获假病毒后用TZM-bl细胞进行单周期感染试验,检测特定位点改造对功能性假病毒形成能力的影响。改造之前样品S12-42-1的免疫印记的实验结果显示弥散的条带,蛋白大小约160kD,但单周期感染试验中其S/CO(样品信号值与临界值的比值)小于1,即不能形成假病毒。将该样品第457位氨基酸由丙氨酸变成天冬氨酸后,用突变体S12-42M进行单周感染试验,其S/CO值为6.65,表示突变体能够形成假病毒。结果表明HIV-1膜抗原部分位点的改变影响假病毒的形成或假病毒感染细胞的能力。     

Diversity of Culturable Bacteria Isolated from Highland Barley Cultivation Soil in Qamdo,Tibet Autonomous Region

The soil bacterial communities have been widely investigated. However, there has been little study of the bacteria in Qinghai-Tibet Plateau, especially about the culturable bacteria in highland barley cultivation soil. Here, a total of 830 individual strains were obtained at 4°C and 25°C from a highland barley cultivation soil in Qamdo, Tibet Autonomous Region, using fifteen kinds of media. Seventy-seven species were obtained, which belonged to 42 genera and four phyla; the predominant phylum was Actinobacteria (68.82%), followed by Proteobacteria (15.59%), Firmicutes (14.29%), and Bacteroidetes (1.30%). The predominant genus was Streptomyces (22.08%, 17 species), followed by Bacillus (6.49%, five species), Micromonospora (5.19%, four species), Microbacterium (5.19%, four species), and Kribbella (3.90%, three species). The most diverse isolates belonged to a high G+C Gram-positive group; in particular, the Streptomyces genus is a dominant genus in the high G+C Gram-positive group. There were 62 species and 33 genera bacteria isolated at 25°C (80.52%), 23 species, and 18 genera bacteria isolated at 4°C (29.87%). Meanwhile, only eight species and six genera bacteria could be isolated at 25°C and 4°C. Of the 77 species, six isolates related to six genera might be novel taxa. The results showed abundant bacterial species diversity in the soil sample from the Qamdo, Tibet Autonomous Region.     

茉莉酸作用的分子生物学研究

茉莉酸及其衍生物茉莉酸甲酯等统称为茉莉酸盐,是广泛存在于植物中的一种生长调节物质,在植物细胞中起着非常重要的作用。介绍了茉莉酸生物合成过程中关键酶基因的克隆、表达及调控,并对茉莉酸的一些突变体进行了分析,结果 显示茉莉酸在发育及防御尤其是在雄性不育及抗病虫害方面起着非常重要的作用,同时综述了茉莉酸信号转导的最新成果。     

茉莉酸作用的分子生物学研究

茉莉酸及其衍生物茉莉酸甲酯等统称为茉莉酸盐,是广泛存在于植物中的一种生长调节物质,在植物细胞中起着非常重要的作用,介绍了茉莉酸生物合成过程中关键酶基因的克隆、表达及调控,并对茉莉酸的一些突变体进行了分析,结果显示茉莉酸在发育及防御尤其是在雄性不育及抗病虫害方面起着非常重要的作用,同时综述了茉莉酸信号转导的最新成果。